Protein ZmC3H38
ZmC3H38 is a protein in the C3H family.
Information
TF Name: ZmC3H38
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H38
Uniprot ID: B4FEY0
Subgenome: 2

Protein ZmC3H38

ZmC3H38 is a protein in the C3H family.

Overview of domains present in v5 transcripts
PF00013PF00642PF16131PF18044PF18345
Zm00001eb206080_T001
Zm00001eb206080_T002
Zm00001eb206080_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d053682DAPseq no logo sequence fimo position
Zm00001d053682DAPseq no logo sequence fimo position
Zm00001d053682ChIPseq no logo sequence fimo position
Zm00001d053682PChIPseq no logo sequence fimo position

Interactions where ZmC3H38 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmC3H38 is the target  
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There are 41 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb206080_T001 from maize genome v5

Amino Acid Sequence
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MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF16131
PF00642
PF18044
PF00642
PF18044
PF16131
PF00013
PF00642
PF16131
PF18044
Hover here to show all domains

Nucleotide Sequence
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ATACACATTACTCATAAAAAAACGG...

GRMZM2G056920_T01 from maize genome v3

Amino Acid Sequence
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MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

Nucleotide Sequence
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GGCGCCGCTGTTCGCAACCCAAGCA...

GRMZM2G056920_T02 from maize genome v3

Amino Acid Sequence
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MTNLGGATIAPPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPM
APPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPM
ANPGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMV
IELIVSISGIGSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

Nucleotide Sequence
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GGCGCCGCTGTTCGCAACCCAAGCA...

GRMZM2G056920_T03 from maize genome v3


Related TFome: pUT3060

Amino Acid Sequence
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MVLLLLILIIFSSCSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIAPPGGMMMDGPPTPIVKTRLCNKYNTAEGCK
WGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPM
APLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQI
SSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGIGSNFKTKMCENFAKGSCSYGGKCHFAHGES
ELRKPAAA

Nucleotide Sequence
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TCTAGACACATGGTATCAATGTCCG...

Zm00001d053682_T001 from maize genome v4

Amino Acid Sequence
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MDGSRKRVDAEDVKGDSTGGKRLRASESFQSGVGSKVKLCTNFFSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIA
PPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPM
APPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPAS
FGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGI
GSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

Nucleotide Sequence
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ACACATTACTCATAAAAAAACGGAA...

Zm00001d053682_T002 from maize genome v4

Amino Acid Sequence
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MAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPA
SFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISG
IGSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

Nucleotide Sequence
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GGACCACCACCAACCGGTTATTTTG...

Zm00001eb206080_T002 from maize genome v5

Amino Acid Sequence
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MVLLLLILIIFSSCSTYGCPFGEGCHFVHYFPGDYRAVSEMTNLGGATIAPPGGMMMDGPPTPIVKTRLCNKYNTAEGCK
WGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPM
APLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMANPGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQI
SSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMVIELIVSISGIGSNFKTKMCENFAKGSCSYGGKCHFAHGES
ELRKPAAA

Nucleotide Sequence
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GGGCGCCGCTGTTCGCAACCCAAGC...

Zm00001eb206080_T003 from maize genome v5

Amino Acid Sequence
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MTNLGGATIAPPGGMMMDGPPTPIVKTRLCNKYNTAEGCKWGDRCHFAHGESELGKSMMDNYMPPPIGPPPTGYFAPPPM
APPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPMAPPPMAPPPMAPLPMAPPPMAPPPM
ANPGLATPASFGAYATAKISVDASLAGGIIGKGGANIKQISSVTGAKVVIQEDRHESDTSLKNIEFEGTFDQIRNASAMV
IELIVSISGIGSNFKTKMCENFAKGSCSYGGKCHFAHGESELRKPAAA

Nucleotide Sequence
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GCAGTAGCCGAGCCAACGAAGGCGT...


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